Merge branch 'trunk' of https://github.com/the-virtual-brain/scientific_library into trunk

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4730 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Merge branch 'SEEG_monitor' of https://github.com/i-Zaak/scientific_library into iZaak-seeg

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4731 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Readded Epileptor model. Added more tests for TVB controllers.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4735 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Added library tests.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4740 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Read latest code and small cleeanup:
- remove __init__.py from scientific_libary
- results from library-tests should be written in a different XML file.
- add tvb_library_test in setup_extra.py, to be installed separately when preparing a build machine.
- enhance run_tests scripts to include also the scientific-library test


git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4741 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Added datatypes tests.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4742 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Enhanced scientific library tests.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4743 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Fix test failing on linux

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4745 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Fix wrong fix :-) 

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4746 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Added parameters to reproduce figures from article in docstrings and modified the tutorial accordingly

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4747 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Added some more tests and changes some previously added tests.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4748 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Moved contrib folder inside of the scientific library

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4749 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Added some more tests.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4751 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Small fix to surfaces test.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4752 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Added scientific library license to scientific library tests.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4753 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Fixed a bug I introduced in SJ models

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4754 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
TVB-895
Work on preparing a new release 1.0.3.1 which will include a simulator fix

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4755 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Summing modes again in SJ models. Arrays will be properly broadcasted.

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4756 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Fix duplicated lines in SJ-3D

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4757 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1
Make use of newaxis; keepdims= True in numpy.sum raises a Type Error

git-svn-id: https://repo.thevirtualbrain.org/svn/tvb/trunk/scientific_library@4758 1c0e02f0-7929-43c0-8fb3-3293bf43b0d1