bugfix - the code crashed for Yokogawa due to removal of initialisation of the shape.fid field.

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9449 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - etf mode ends with 100%

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9450 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
automatically synchronized identical files to revision 9450

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9451 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix(2507): the behaviour for the default option hassampleinfo=ifmakessense in ft_datatype_raw is now to *not* reconstruct sampleinfo if it was not present in the input data. Sampleinfo will be kept if it is present in the input data, and if it is consistent with the actual trial structure.


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9452 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
automatically synchronized identical files to revision 9452

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9453 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
primarily a big GUI update and some other small adjustments)

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9454 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
trivial - crosslinking to *FT*_statistics_montecarlo

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9455 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
Major update to new version of the code.

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9456 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - This patch adds a new event field for neuromag machines. Instead of using the provided accumulated digital trigger channel, it calculates its own value using the individual binary channels. This is safer as the builtin methods sometimes fails when two binary channels have a slight delay.
The commit only adds code and leaves the rest untouched. See https://github.com/fieldtrip/fieldtrip/pull/36 and http://bugzilla.fcdonders.nl/show_bug.cgi?id=1867. Thanks to Thomas.


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9457 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - added support for custom vertexmarker, default is '.', can also be 'o', 'x' etc.


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9458 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - in case of torque error there is no output file. The code would remain waiting for the output file, now it continues and detects the error. Also added mlock/munlock to make it more robust to on-the-fly updates of fieldtrip on home/common.


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9459 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix #2548 - dim is only copied over if it already existed

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9460 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix - resolved an issue with the detection of neuroscan data as ext1020 system. See http://bugzilla.fcdonders.nl/show_bug.cgi?id=2549


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9461 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
automatically synchronized identical files to revision 9461

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9462 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix-corrected handling of switch case with two strings

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9463 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix - convert segmentation to parcellation when needed, see http://bugzilla.fcdonders.nl/show_bug.cgi?id=2556 (thanks to Raghavan)


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9464 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
automatically synchronized identical files to revision 9464

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9465 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - added test script (and small change to some debugging info printed on screen), see http://bugzilla.fcdonders.nl/show_bug.cgi?id=2558


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9466 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix-added testscript for bug2559

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9467 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - changed properties for facealpha and facecolor to have a better match between mask and functional data


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@9468 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0