Merge pull request #2994 from chris-allan/fix-password-encoding

Ensure that identity request variables are UTF-8 encoded
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 2895 (Reload groups after users added/removed)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 2979 (Thumbnail cache busting)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 2985 (Download preserves directories of original files)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3016 (Jquery update migration (Part 1 of n))
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3028 (Matlab getPlane efficiency)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3029 (OmeroCpp: Disable RMap and search tests)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3031 (Permissions test all)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3032 (CLI: add OMERO_SESSION_DIR environment variable)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3035 (Add local table of contents to auto-generated configuration page)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3036 (Update develop submodules)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3037 (Group sudo)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3039 (Float rendering web)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3040 (Flake8 various files under OmeroPy)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: PR 3046 (updating auto generated text)
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only: branch jburel:qa-submit-new
merge develop -Dorg -Ijburel/openmicroscopy:qa-submit-new -Ssuccess-only

Repository: openmicroscopy/openmicroscopy
Excluded PRs:
  # PR 3042 will-moore 'Download dataset project' (label: exclude)
  # PR 3000 jballanc 'Update artifacts for Lucene, Hibernate, and Spring' (user: jballanc)
  # PR 2987 rleigh-dundee 'travis: Build with Oracle JDK 8' (status: failure)
  # PR 3033 jburel 'Float re' (label: breaking)
  # PR 3043 ximenesuk 'Flake8 various files under OmeroPy (part 2)' (exclude comment)
  # PR 2412 qidane 'Extra annotations' (exclude comment)
  # PR 2182 joshmoore 'Read only flag' (label: exclude)
  # PR 2585 aleksandra-tarkowska 'making time_zone and first_day_of_week configurable' (exclude comment)
  # PR 2363 dominikl 'Java Gateway API' (label: exclude breaking)
Already up-to-date.

Merged PRs:
  # PR 2895 dominikl 'Reload groups after users added/removed'
  # PR 2979 will-moore 'Thumbnail cache busting'
  # PR 2985 will-moore 'Download preserves directories of original files'
  # PR 3016 dpwrussell 'Jquery update migration (Part 1 of n)'
  # PR 3028 sbesson 'Matlab getPlane efficiency'
  # PR 3029 rleigh-dundee 'OmeroCpp: Disable RMap and search tests'
  # PR 3031 bramalingam 'Permissions test all'
  # PR 3032 sbesson 'CLI: add OMERO_SESSION_DIR environment variable'
  # PR 3035 sbesson 'Add local table of contents to auto-generated configuration page'
  # PR 3036 snoopycrimecop 'Update develop submodules'
  # PR 3037 joshmoore 'Group sudo'
  # PR 3039 will-moore 'Float rendering web'
  # PR 3040 ximenesuk 'Flake8 various files under OmeroPy'
  # PR 3046 aleksandra-tarkowska 'updating auto generated text'
Merged branches:
  # jburel:qa-submit-new

Repository: openmicroscopy/bioformats
Excluded PRs:
  # PR 1015 qidane 'Messy binary' (exclude comment)
  # PR 1309 melissalinkert 'Allow tile-based access of large JPEG-2000 images' (exclude comment)
  # PR 1265 qidane 'New units' (label: exclude breaking)
  # PR 858 melissalinkert 'Initial support for Veeco AFM data' (label: exclude)
  # PR 857 melissalinkert 'Initial support for Zeiss .lms files' (label: exclude)
  # PR 1296 melissalinkert 'Add test for getRequiredDirectories' (label: exclude)
  # PR 1315 LeeKamentsky 'IM3Reader for Perkin-Elmer Nuance' (user: LeeKamentsky)
  # PR 1161 sommerc 'Initial CellH5 Reader class' (user: sommerc)
  # PR 1177 rleigh-dundee 'specification: Add metadata for HDF5 embedding' (exclude comment)
  # PR 1054 qidane 'Additional annotation points throughout the model' (exclude comment)
  # PR 816 melissalinkert 'Add support for multi-channel Volocity Clipping datasets' (label: exclude)
  # PR 1249 PremyslFiala 'ND2 - Bug fixes' (user: PremyslFiala)
Already up-to-date.

Merged PRs:
  # PR 1154 melissalinkert 'Leica: prevent exception when linking EmissionFilter'
  # PR 1302 sbesson 'Add branch-specific link for downloading the JAR file if unfound (rebased onto develop)'
  # PR 1323 melissalinkert 'Add bit-level operations to RandomAccess{Input, Output}Stream'
  # PR 1328 sbesson 'Use in-place caching by default in Memoizer'
  # PR 1339 melissalinkert 'Amaris FlowSight'
  # PR 1343 rleigh-dundee 'C++: TIFF pixel data read/write interfaces and skeleton implementation'
  # PR 1347 melissalinkert 'AIM: fix offset calculation for > 4GB files'

Repository: ome/scripts
Already up-to-date.

Repository: openmicroscopy/ome-documentation
Already up-to-date.

Merged PRs:
  # PR 973 hflynn 'Team workflow doc'
  # PR 986 sbesson 'Document usage of new OMERO_SESSION_DIR envvar for the CLI'
  # PR 988 sbesson 'Property index'
  # PR 989 sbesson 'Add paragraph about the store recycling while retrieving pixel data'
  # PR 990 kennethgillen 'for users who have compiled isapi_wsgi on x64'
  # PR 991 aleksandra-tarkowska 'updating documentation to use new glosary'
  # PR 992 ximenesuk 'Add disk usage sections to cli pages.'

Generated by OME-5.1-merge-push#463 (http://ci.openmicroscopy.org/job/OME-5.1-merge-push/463/)