fix list to put DE/non-DE Hamming dists in
add list of Hamming distances to end of gene type list
modularize Hamming distance calculation, before testing
return dictionary in Hamming dist function
complete modular use of Hamming dist function
complete Hamming dist calculation and Mann-Whiteney U test
add feedback messages to Hamming distance function
make Hamming dist calc feedback better
add creation of boxplot, possibly work
change Clustal align to assume Clustal in path
change TeX file to report and add p-value to part 2
remove clustal assert and printing Hamming
finish crossSpecies with ending feedback message
check if csv and script for second part exists in bash
print actual odds ratio when printing sig pathways
fix spacing between feedback messages
fix spacing in Hamming distance
fix boxplot error on church server
fix missing genes count and change boxplot title