Fix testing for JSON parameter existence.
Use exception block instead as exception was still being thrown.
Try manually supply empty JSON arg in tasks.py
Fix parameter error to db method`
Fix db query param mismatch
Add gzip flag to count
Integrated shuffle code into new branch
Name the command line parameter properly (should be gzip)
Shuffle code and bug fixes
Make count correctly handle file object for gzipping
Now adds information to the correct database columns
fix pep8 errors
Merge remote branch 'origin/shuffle-two' into fix2

Conflicts:
	codonpdx/calc.py
Merge branch 'fix2' into shuffle-two
Bugfixes; add default argument for shuffle
Updates to push shuffle results to database
Fix parameter mismatch with new insertInputOrganism function
Properly initialize shuffle_acid_total
Split ratio function to handle shuffled sequences
Fix typo