Basic SPARQL against an example BED file. Test on uncompressed bed file
via mvn assembly:assembly; ./sparql-bed.sh $bed_file $sparql_query
Initial commit
Merge branch 'master' of github.com:JervenBolleman/sparql-bed
better readme
Update README.md
Externalize the BEDFileReader so that its easier to reload.Investigated
Picard to see if there is a BED file reader in there but I did not see
it.
Use the Trible BED FileReader
No need for homegrown reader use the one from tribble
#1 Basic join of two statement patterns is collected into one iterator
if predicates of a certain type and subject is shared.
Optimize imports
License
Requirements added to README.md
Added jetty configuration so that jetty:run-war works for the opensesame
workbench.
Fix a few simple wait issues. Also no need for injecting a sail we will
use the simple valuefactoryImpl which is faster for the unit tests.

Also correct sesame workspace settings.
Make sure to close the bed file after reading it.

#3 Renamed the BEDRepository to BEDFileStore.
Fixed empty methods to make sense (even if slow) or throw appropiate
errors.

Organized imports
#3 Started work on this but it looks like the workbench code also needs
some modifcations to get this to work correctly.
Organize imports
Use a released sesame library for easier testing by other users
Make it all work with sesame 2.6.10