[maven-release-plugin] prepare for next development iteration
Version numbers fixed for 3.0.1-SPAPSHOT.
Updated file naming scheme for downloaded apps, no longer checks for updates of uninstalled apps, downloaded app names now contain version.
Fixes #1641: Removed "Contents…" and "List Available Commands" from Help menu
References #1641: Re-added "Help > Contents…" menu.  Didn't bother updating actual manual.  We should do that prior to each release on the appropriate release branch.
Version numbers are updated to 3.1.0-SNAPSHOT.
Added class for inter-app dependency management for issue #1644
Fixed incompletely renamed file
Renamed test package class to match renamed class. Reason for rename was name that seemed unecessarily long.
Merged changes since branching.
Fixes #1635 (Node Size displayed in the Edge and Network default visual properties)
Fixes #1680: functions-equations-impl now works
Fix for #1642 - disable multiple selection for now. We may want to come back to it later, though that would require new methods to be implemented.
Changing icon to 3.0 one...
Set external frame size to current size instead of preferred size when floating a CytoPanel
Updates to credits are merged from branch.
Fixes #1691 (Parent network not loaded in 3.0 from 2.8 generated session file) : Also making sure stale values for network attribute "Cy2 Parent Network.SUID" are removed when a Cy2 session is loaded.
Updated to CustomGraphics to simplify generics signature
Minor changes: just fixed a typo in the javadoc.
Fixes #1662 (Attributes in VizMapper are sorted in ASCII/Unicode order, not lexicographical order)