Imaris HDF: make sure that all resolutions have the same ZCT sizes

Fixes #12200.
target-test-runner: exclude package and log4j jars

Fixes #12114.
Remove JENKINS_JOB variable and point at the release components
Add extlink for source directories and fix links across doc
Miscellaneous redirects
Redirect svn.openmicroscopy.org.uk links
Redirect http://loci.wisc.edu/software links
Deprecate download_components in favor of downloads extlink
Point at other artifacts  directly using the downloads extlink
Remove reference to bfcppdoxygen API

Ideally we should be able to integrate Doxygen documentation generation
deployment as part of the release workflow.
merge develop -D org: PR 857 (Initial support for Zeiss .lms files)
merge develop -D org: PR 858 (Initial support for Veeco AFM data)
merge develop -D org: PR 981 (Ignore namespaces when filling in an XMLAnnotation's Value)
merge develop -D org: PR 983 (Woolz: make sure the service is initialized when calling openBytes (rebased onto develop))
merge develop -D org: PR 1028 (Large fileset performance improvements (rebased onto develop))
merge develop -D org: PR 1049 (DICOM: fix file grouping so that path names are normalized (rebased onto develop))
merge develop -D org: PR 1060 (Allow dist-matlab to run on Windows)
merge develop -D org: PR 1070 (DICOM: expand sequence reading to include known sequences (rebased onto develop))
merge develop -D org: PR 1082 (C++: Add support for integers of different endianness)
merge develop -D org: PR 1092 (Allow for a >1 count increment in B&H .sdt Files. (rebased onto develop))