Readme
Added matlab files from review
Added method for SMR protein representation
Worked toward ambiguous translation
use biopython translation
Merge pull request #7 from rzeller/translation

Translation
MatrixRep can now output SMR and PSSM matrix representation of proteins, databases need to be unzipped and modified slightly before PSSM will work - see documentation
Merge branch 'master' of https://github.com/rzeller/kaggle-hiv
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modified output of PSSM to just output labels and PSSM values
Just practicing
implemented PseudoPSSM
implemented average blocks
implemented autocovariance, DCT, and SVD
MatrixRep updated with new documentation on database creation
Merge pull request #8 from rzeller/matrix-feature-extraction

Matrix feature extraction
updated database creation documentation
Added file to make blast compatible DB for PSSM creation
removed database folder - moved to separate repo
updated documentation for PSSM to include minimum length requirement for protein