Merge pull request #42 from frakkopesto/master

Added functionality to interface with FreeSurfer
Fixing some of the issues with mrAnat as well as with the session migration.
Merge pull request #43 from vistalab/transformChange

Fixing some of the issues with mrAnat as well as with the session migration.
svn tools no longer needed since we moved to git
Update README.md

Added external dependencies.
Fixed bug in caculating the transform

The commit yesterday fixed the issue for some datasets, but screwed up
the transform calculation for others (as discovered today). This edit
has been tested to work on a few different datasets. As always, more
testing is needed...
eliminated a subroutine that is never called
cleaned up comments
changed error output to display properly
Merge branch 'master' of http://github.com/vistalab/vistasoft
Merge pull request #45 from rfdougherty/master

Fixed a bug introduced yesterday
Added a check to ensure that the session has been updated.
Fixed the problem if keepFrames is not specified in the parameters.
Update to the session version code. Now leveraging mrVistaVersion to check if the migration occurred correctly.
Update to ensure that the rotation and perumuation needed to bring the sample volume into standard space is unambiguous
Merge pull request #44 from vistalab/fixSessionCheck

Added a check to ensure that the session has been updated.
Fixing an issue with the motion compensation code calling an old version of Select Scans that wasn't using 'viewGet'
Merge pull request #46 from vistalab/fixMotionComp

Updated SelectScans to use view Get
Fix a small issue where the keepFrames are not being calculated correctly. As well, roll-back a MATLAB suggested change to replace 'find' in a function.
Merge pull request #47 from vistalab/fixKeepFrames

Fix a small issue where the keepFrames are not being calculated correctl...