Fix http-builder dependency
Merge pull request #81 from mirasrael/fix_http_builder_dependency

Fix http-builder dependency
Remove integration test on Rmodules controller

This was also a problematic test because it was using a unit test mixin
in an integration test and completely wrecking the metaclasses in the
process.
Update to recommended dep versions
Small test logging change
Fix remaining tests
Try to fix travis
Update logo images for new branding.
transmartApp needs to depend on -core-db-tests
Merge pull request #82 from transmart/fix_tests

Fix tests and auto-inline plugins
Re-committing 1.1 user manual changes
Update BuildConfig.groovy

Integrating galaxy plugin for test purposes. I might revert it later on.
Reverting dependency for resources plugin from resources-1.2.7 to resources-1.2.1. This fixes TMART-360 - the HighDimensional Planel for heatmap-based advance workflows was not displaying - a resource in RModules, panels/highDimensionalWindow.html, was getting a 404. This does not happen with resources-1.2.1.
Increasing ROI popup window width
Restrict export to users with such permission
Commented 'if' section due to missing table field

The field 'data_category' do not exist in the table 'search_keyword_term '. Once the field is added to the table along with its data this part should will be commented out. We will work on adding the field and the data shortly but in the meantime this will fix the current issue. This should solve the Region of Interest search of the Gwas module.
Merge pull request #83 from transmart/restrict-export-to-view-users

Restrict export to users with such permission
Re-enable Analysis Jobs tab

The code for this tab is, however, a complete mess and it doesn't work
for the analyses I tested (context path is not included; same in
thehyve/master).
Ensure nameIndexMap contains valid keys
Extract loadPlugin method, refactoring for Dalliance plugin loader