MANTA-126 expand breakend regions for large events
MANTA-131 numerous changes to reduce false positive somatic calls
tmp commit
MANTA-131 get rid of another FP case
MANTA-131 added tier2 reads to candidates
MANTA-131 greater ref/alt pair handle consistentcy
MANTA-131 limit submap reads to somatic analysis
MANTA-131 one more efficientcy fix
update cl
MANTA-131 bugfix
MANTA-126 start work to support complex candidates
MANTA-126 rename
MANTA-126 more prelim reorganization
MANTA-126 add simple bp pair grouping
MANTA-126 hammering junction grouping further in..
MANTA-126 forgot new file...
MANTA-126 fix multi-junction assertion
MANTA-126 exclude small deletions from mj pairing
MANTA-126 fix logic in last patch
MANTA-126 fix multi-junction finder