Removed not needed files
Moved files around for Maven
Updated ignore file
First cut at Mavenizing the project
Trying to get things compiling
Revert "First cut at Mavenizing the project"

This reverts commit 5e72433bc401456e5d0e5c1668eb04985bc7a775.

Conflicts:
	.classpath
	src/shadow/parser/javacc/ShadowFileParser.java
	src/shadow/typecheck/BaseChecker.java
Revert "Trying to get things compiling"

This reverts commit ca69c30265ad9de4e811092d827d434c2b706d1b.

Conflicts:
	src/shadow/typecheck/BaseChecker.java
Moved files around for Maven
Added target to the ignore
Moved the test files to the standard location in Maven
- Also updated the build path settings in Eclipse
Changed TypeMismatchException to ShadowTypeMismatchException
- Created ShadowTypeMismatchException class
- Changed Apache digester package to digester3
Added maven stuff to Eclipse files
Updated/created log4j.xml file locations
Updated the test_linux_config file
- Removed a bogus test.pl file
Reverted connect method change because it was breaking things
Added shade plugin to pom.xml to build uber JARs
Added debug output
Updated ignore file
Updated pom file to include the running of jjdoc
- Also generates an ugly site
Removed native LLVM rounding functions
- They weren't found on my Linux install, and not needed for most things