fixing duplicated zoom buttons
fixing roi plugin to work when embedding viewer
updating roi plugin to support dynamic name
preparing tiles before image loads
adding missed libraries
fixing naming issues for scalebar and roi plugins
Merge remote-tracking branch 'origin/develop' into viewer_fixes
Adding removal of deprecated methods to history
Regenerate keystore (+1000 days from now)

rm lib/keystore
./build.py keystore
Also mention Gateway and methods
Merge pull request #3252 from joshmoore/history-update

History update
Merge pull request #3217 from aleksandra-tarkowska/viewer_fixes

Viewer fixes
Merge pull request #3251 from manics/update_selfsigned_keystore

Regenerate keystore (+1000 days from now)
merge develop -Dnone -Ibreaking -Eexclude -Ssuccess-only

Repository: openmicroscopy/openmicroscopy
Excluded PRs:
  # PR 3042 will-moore 'Download dataset project' (user: will-moore)
  # PR 3086 will-moore 'Create image by tiling 12459' (user: will-moore)
  # PR 3216 joshmoore 'Misc DB fixes (5.1DEV__17)' (status: pending)
  # PR 3221 dominikl 'Wrap description text to avoid horizontal scroll bar' (user: dominikl)
  # PR 3181 joshmoore 'Update to Hibernate 3.6 (See trac2570)' (label: exclude)
  # PR 3239 sbesson 'Flake8 top-level OmeroWeb components' (user: sbesson)
  # PR 2363 dominikl 'Java Gateway API' (label: exclude)
  # PR 3256 jburel 'Increase Limit' (user: jburel)
  # PR 3254 snoopycrimecop 'Update develop submodules' (user: snoopycrimecop)
  # PR 3249 manics 'Tables set all metadata 12606' (user: manics)
  # PR 3207 will-moore 'General pane web 2' (user: will-moore)
  # PR 3098 aleksandra-tarkowska 'Metadata reimport' (user: aleksandra-tarkowska)
  # PR 3208 sbesson 'Update the OMERO install script to test Web login with CSRF (rebased onto develop)' (user: sbesson)
  # PR 3240 dominikl 'Insight units followup' (user: dominikl)
  # PR 3141 dpwrussell 'jstree upgrade (Functionality Review Only)' (status: failure)
  # PR 3237 zeb 'Fix web attachment error msg develop' (user: zeb)
  # PR 2182 joshmoore 'Read only flag' (user: joshmoore)
  # PR 3156 aleksandra-tarkowska 'Templates cleanup' (user: aleksandra-tarkowska)
  # PR 3236 will-moore 'Fix 'Save to All' in Preview panel' (user: will-moore)
  # PR 3229 dominikl 'Use Units in ROI/MeasurementTool' (user: dominikl)
  # PR 3248 mtbc 'once map key is found, can stop looking' (user: mtbc)
  # PR 3255 manics 'Return column descriptions in tables.getHeaders()' (user: manics)
  # PR 3218 will-moore 'Units metadata panel' (user: will-moore)
  # PR 3247 joshmoore 'C++ green 2' (user: joshmoore)
  # PR 3228 mtbc 'fix #11779: graph operations use "compiler" rather than "rollback" strategy' (user: mtbc)
  # PR 3253 joshmoore '(TMP) C++ commit for "Insight units followup"' (user: joshmoore)
  # PR 2585 aleksandra-tarkowska 'making time_zone and first_day_of_week configurable' (exclude comment)
  # PR 3245 will-moore 'Get pixels size units' (user: will-moore)
  # PR 3157 jburel 'Reset password' (user: jburel)
  # PR 3000 jballanc 'Update artifacts for Lucene, Hibernate, and Spring' (user: jballanc)
Already up-to-date.

Repository: openmicroscopy/bioformats
Excluded PRs:
  # PR 1458 sbesson 'Fix Javadocs warnings' (user: sbesson)
  # PR 1460 rleigh-dundee 'C++: Implement MetadataConverter' (user: rleigh-dundee)
  # PR 1161 sommerc 'Initial CellH5 Reader class' (user: sommerc)
  # PR 1015 qidane 'Messy binary' (exclude comment)
  # PR 1442 bramalingam 'Update roi handler' (user: bramalingam)
  # PR 1407 melissalinkert 'TIFF: fix plane count calculation for pyramids with multiple planes' (user: melissalinkert)
  # PR 1457 melissalinkert 'IM3: fix memoization and whitespace' (user: melissalinkert)
  # PR 1426 qidane 'Initial Rendering Definitions schema' (exclude comment)
  # PR 857 melissalinkert 'Initial support for Zeiss .lms files' (user: melissalinkert)
  # PR 1177 rleigh-dundee 'specification: Add metadata for HDF5 embedding' (exclude comment)
  # PR 1437 stelfrich 'Changed handling of empty series names in ND2 files' (user: stelfrich)
  # PR 1461 csachs 'Changed ND2 metadata string handling to work properly with empty strings' (user: csachs)
  # PR 1459 jburel 'Fix writing of tiff description' (user: jburel)
  # PR 1443 joshmoore 'Genshi ZIP' (user: joshmoore)
  # PR 1365 ctrueden 'PrairieView 5.2 fixes and improvements' (user: ctrueden)
  # PR 1309 melissalinkert 'Allow tile-based access of large JPEG-2000 images' (exclude comment)
  # PR 858 melissalinkert 'Initial support for Veeco AFM data' (user: melissalinkert)
  # PR 1381 melissalinkert 'Parse physical pixel sizes from CellSens .vsi datasets' (user: melissalinkert)
  # PR 1420 qidane 'Updating samples and adding units samples' (user: qidane)
Updating c3521e7..237d975
Previously merged:
  # PR 1456 mtbc 'add note about using mvn eclipse:eclipse'
  # PR 1454 rleigh-dundee 'C++: Autoload schema catalogues and set up environment for tests'
  # PR 1366 ctrueden 'Miscellaneous cleanup'
  # PR 1452 joshmoore 'Use __import__ for generateDS to handle FS case issues'
  # PR 1448 melissalinkert 'Metamorph: allow both sanitized and unsanitized delimiters'
  # PR 1455 sbesson 'Remove source code hyperlinks from Java source files'
  # PR 1453 jburel 'Fix mock object to match changes from int to double for channel'

Repository: ome/scripts
Already up-to-date.

Repository: openmicroscopy/ome-documentation
Excluded PRs:
  # PR 1044 hflynn 'Faq stuff' (user: hflynn)
  # PR 1042 mtbc 'document graph traversal reimplementation for developers' (user: mtbc)
  # PR 1041 joshmoore 'Units documentation' (user: joshmoore)
  # PR 1038 aleksandra-tarkowska 'updating web doc for embedding viewer' (user: aleksandra-tarkowska)
Updating fb16f30..e6a73a7
Previously merged:
  # PR 1047 manics 'Web iis docs'
  # PR 1049 snoopycrimecop 'Update auto-generated properties'
  # PR 1045 ximenesuk 'Explain default Python tests.'
  # PR 1046 hflynn 'Removing IDelete api link as service deleted'
  # PR 1048 snoopycrimecop 'Update auto-generated properties'

Generated by OME-5.1-breaking-push#217 (http://ci.openmicroscopy.org/job/OME-5.1-breaking-push/217/)