adding vagrant setup with mysql.  Needs more work for actual setup, but this is a start
TRUNK-4025: Fixing query issue with MySQL where you cannot update a table and select from the same table in a subquery
TRUNK-4025: Fix MD5 sum typo
TRUNK-3868: Combine PatientDAOTest and HibernatePatientDAOTest and remove HibernatePatientDAOTest
TRUNK-3868:replace HibernatePatientDAO with PatientDAO in @see anotation
TRUNK-4145: change and restrictions to or restrictions and retun distinct tuples
TRUNK-4145: remove drug.concept restriction and add some unit tests
TRUNK-4145: verify unit test with maven clean install and create unit test with conventions
TRUNK-3919: add changed_by and date_changed columns to Location and Location_Tag tables
TRUNK-3919: add unit test for trunk-3919
TRUNK-2694 Fix Performance hog: Maps and sets of URLs
Fixed sonar blocker issue
Merge pull request #500 from dkithmal/TRUNK-3868

TRUNK-3868: Combine PatientDAOTest and HibernatePatientDAOTest and remov...
Merge pull request #453 from fouadz/TRUNK-4025

TRUNK-4025: Fixing query issue with MySQL where you cannot update a tabl...
TRUNK-4201 Tests in ReflectTest fail when executed with sonar
Merge pull request #494 from dkithmal/TRUNK-4145

TRUNK-4145: change and restrictions to or restrictions and retun distinc...
mysql-connector-java v5.1.8 with mysql server v5.6 causes
MySQLSyntaxErrorException - TRUNK-4210
N+1 Select issue in Concept subentities - TRUNK-4209
Obs.getValueAsString(Locale locale) should localize name if Obs is
valueCoded - TRUNK-4164
Doing some formatting for ReflectTest.java