Updated COMBINE archive export

added vCard details and arguments to exportSEDML
duplicate files
updated Scan1

Now uses new data_state object for rates/concentrations, also converts
rates/species to steady-state versions (R1 --> J_R1)
added .gitignore
added *.pyc to .gitignore
modified .gitignore for building --in-place
fixed order of calling of State() solvers
added settings flag mod.__settings__['scan1_mesg'].
set to True by default.
if set to false, it suppresses all feedback during Scan1(), which is
useful for model parameter fitting or GSDA where the writing to screen
can significantly slow down the scan.
updated copyright date in all file headers
updated copyright notices
deleted documentation that somehow ended up in source
Merge pull request #3 from bgoli/master

accepting my own pull request ... lets try merge
synching
Merge pull request #4 from bgoli/master

Final synch (hopefully)
shouldn't be in source
Updated COMBINE metadata/manifest to latest standard
back again

To hastily deleted
Update README.md
Update README.md