add file accessors
Add mutspec clinseq file access
rename labels
update plotting parameters
indent
format plot
update CNV summary tool.
add test for MutationSpectrum clinseq converge
add clinseq fileaccessors
update stats plot
include datatype in label
add mutationtype converge
update clinseq exome cnv file
check for divide by zero
Sort bed file
make extradescription uniform for diff samples
update column names
increase max indelsize
get RNASeq read counts 1
update snv_indel_report filter