COMP: Removed unused module MRIBiasFieldCorrection. See #3401

For future reference, code has been moved into a dedicated repository.
See https://github.com/Slicer/Slicer-MRIBiasFieldCorrection

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23592 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Removed legacy module AffineRegistration. See #3401

For future reference, code has been moved into a dedicated repository.
See https://github.com/Slicer/Slicer-AffineRegistration

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23593 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Removed legacy module LinearRegistration. See #3401

For future reference, code has been moved into a dedicated repository.
See https://github.com/Slicer/Slicer-LinearRegistration

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23594 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Removed legacy module RigidRegistration. See #3401

For future reference, code has been moved into a dedicated repository.
See https://github.com/Slicer/Slicer-RigidRegistration

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23595 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Removed legacy module BSplineDeformableRegistration. See #3401

For future reference, code has been moved into a dedicated repository.
See https://github.com/Slicer/Slicer-BSplineDeformableRegistration

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23596 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Removed legacy module MultiResolutionAffineRegistration. See #3401

For future reference, code has been moved into a dedicated repository.
See https://github.com/Slicer/Slicer-MultiResolutionAffineRegistration

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23597 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Removed legacy module OtsuThresholdImageFilter. See #3401

For future reference, code has been moved into a dedicated repository.
See https://github.com/Slicer/Slicer-OtsuThresholdImageFilter

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23598 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Removed legacy module OtsuThresholdSegmentation. See #3401

For future reference, code has been moved into a dedicated repository.
See https://github.com/Slicer/Slicer-OtsuThresholdSegmentation

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23599 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix qSlicerApplication compile error when ExtensionSupport is disabled.

This commit fixes the following error:

/path/to/Slicer/Base/QTGUI/qSlicerApplication.cxx:660:7: error: ‘QFile’ has not been declared
       QFile::remove(filePath);

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23600 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix unused variable warning in qSlicerCoreApplication

This commit fixes the following warning occurring when Slicer is build
with extension support is disabled.

/path/to/Slicer/Base/QTCore/qSlicerCoreApplication.cxx: In member function ‘QString qSlicerCoreApplication::defaultExtensionsInstallPath() const’:
/path/to/Slicer/Base/QTCore/qSlicerCoreApplication.cxx:1159:14: warning: unused variable ‘appSettings’ [-Wunused-variable]
   QSettings* appSettings = this->userSettings();

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23601 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix sign-compare warning in qSlicerApplication

This commit fixes the following warning:

/path/to/Slicer/Base/QTGUI/qSlicerApplication.cxx: In member function ‘void qSlicerApplication::setupFileLogging()’:
/path/to/Slicer/Base/QTGUI/qSlicerApplication.cxx:626:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (unsigned int fileNumber=0; fileNumber<numberOfFilesToKeep; ++fileNumber)

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23602 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix unused-but-set-variable warning in vtkImageErode

This commit fixes the following warning happening when building Slicer
in Release:

/path/to/Slicer/Modules/Scripted/EditorLib/Logic/vtkImageErode.cxx: In instantiation of ‘void vtkImageErodeExecute(vtkImageErode*, vtkImageData*, T*, vtkImageData*, int*, int) [with T = double]’:
/path/to/Slicer/Modules/Scripted/EditorLib/Logic/vtkImageErode.cxx:217:26:   required from here
/path/to/Slicer/Modules/Scripted/EditorLib/Logic/vtkImageErode.cxx:76:25: warning: variable ‘tDiff’ set but not used [-Wunused-but-set-variable]
   clock_t tStart, tEnd, tDiff;

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23603 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix unused local typedefs warning in vtkMRMLTransformStorageNode

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23604 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix unused parameter warnings in vtkITKTransformInverse

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23605 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix unused variable warning in vtkITKTransformConverter

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23606 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix overloaded-virtual warnings in vtkITKTransformInverse

This commit fixes warnings of the following form:

In file included from /path/to/ITKv4/Modules/Core/Transform/include/itkBSplineDeformableTransform.h:370:0,
                 from /path/to/Slicer/Libs/MRML/Core/vtkITKTransformConverter.h:27,
                 from /path/to/Slicer/Libs/MRML/Core/vtkMRMLTransformStorageNode.cxx:31:
/path/to/Slicer/Libs/MRML/Core/vtkITKTransformInverse.h: In instantiation of ‘class itk::InverseBSplineDeformableTransform<float, 3u, 3u>’:
/path/to/ITKv4/Modules/IO/TransformBase/include/itkTransformFactory.h:46:25:   required from ‘static void itk::TransformFactory<T>::RegisterTransform() [with T = itk::InverseBSplineDeformableTransform<float, 3u, 3u>]’
/path/to/Slicer/Libs/MRML/Core/vtkITKTransformConverter.h:117:65:   required from here
/path/to/ITKv4/Modules/Core/Transform/include/itkBSplineDeformableTransform.hxx:493:1: warning: ‘void itk::BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>::TransformPoint(const InputPointType&, itk::BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>::OutputPointType&, itk::BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>::WeightsType&, itk::BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>::ParameterIndexArrayType&, bool&) const [with TScalar = float; unsigned int NDimensions = 3u; unsigned int VSplineOrder = 3u; itk::BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>::InputPointType = itk::Point<float, 3u>; itk::BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>::OutputPointType = itk::Point<float, 3u>; itk::BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>::WeightsType = itk::Array<double>; itk::BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>::ParameterIndexArrayType = itk::Array<long unsigned int>]’ was hidden [-Woverloaded-virtual]
 BSplineDeformableTransform<TScalar, NDimensions, VSplineOrder>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23607 3bd1e089-480b-0410-8dfb-8563597acbee