PEP formatting
Changed module name
Made db creation more general to enable later use by other modules
Cosmetics
Changed db connection nehaviour
More PEP8
Broke out db class to enable other db classes.
Drivers got directory to enable multiple different drivers
Also own dir for db lookups
Created better dir structure
Fixes for new dir structure. Also some sqlite code for quant stuff in ompstitch
Bug in readers getting importing from wrong module
Created ompstitch callable for combining openMS and msgfpercolator results
Started using rope in vim, changed gitignore
Made generators also work without namespace
Created ompstitch readers and basereader file for generating xml
typo
Extended readers with pycolator reader
Somehow this file wasnt moved properly to pycolator.py
Reader methods for ompstitch xml things, and a preparation module where output prep things will live in