Fixed conf skipping when already loaded
Updated fetch_all_by_linked_Transcript/transcript_Gene methods to assert_ref and test dbID
now flows garbage collection to MergeCollections
removed NHDF gender hack
Updated param checking, now has more useful error messages
A lot of updates, and EFGUtils usage added
many refinements to config
Moved rev_comp_matrix to new MotifTools. Also moved tmp dir creation to pwm_genome_map to reduce chance of deleting the wrong directory