AutoAligner.getConcatenatedPath()
JSON: FileAdapter

Workaround for buggy deserialization of vanilla File objects from absolute paths
Metropolis-Hastings with speaker-dependent Gaussians
replace all silences with master silence states before scoring
don't relearn silence models (kludge!)
perframe plot
AlignmentScorer state merge fix
standard resource/cache paths

fixes #12
minor UI fixes

select default export file filter
aligner init notification
unified error dialogs
removed useless MTTM refresh in ctor
bumped resources to 20140416
export non-alignable elements to 0-length intervals (TextGrid)

Fixes #10 (although we're using 0-length intervals within the word tier, rather than an extra point tier)
forbid backwards transitions
StatePath concatenation: fix dangling transition probabilities
adapted AlignmentScorerTest
unit test cleanup
clarified situation with initial frame ahead of final frame
TCOFWhoifier: handle faulty overlaps
stricter TRS parsing
better messages in suitableAudioFile
volatile cache