Merge pull request #3 from jiafulow/prepare-v011

Changed stub filtering and fake superstrip implementations
Added hitEvtIds for clusters and stubs, local coordinates for stubs
Added maxPatterns option in PatternMatcher
Separated classes and functions from drawer_pgun.py

Used more events for pattern generation
Added img000.root..img004.root
Various minor fixes in NTupleTools
Added pixelDigi info
Minor fixes
Updated batch scripts
Changed the tower indexing in PatternGenerator
Changes in the plotter tools

- Added drawer_layerdisk.py
Changes in the plotter tools. [2]

	renamed:    drawer_bankgen.py -> drawer_amsim.py
Changes in the plotter tools. [3]

- Reduce LOC of drawer_layerdisk.py