Add Hodoscop Time of Flight calculation
Conversion of h_tof.f to THcHodoscope::CoarseProcess method.

 Quick summary of third version at  branch zafar1:

 New functions in THcScintillatorPlane.h
 ---------------------------------------
    TClonesArray* GetPosADC() { return fPosADCHits;}; // Ahmed
    TClonesArray* GetNegADC() { return fNegADCHits;}; // Ahmed
    TClonesArray* GetPosTDC() { return fPosTDCHits;}; // Ahmed
    TClonesArray* GetNegTDC() { return fNegTDCHits;}; // Ahmed

 New data members in THcHodoscope.h
 ----------------------------------
    TClonesArray* scinPosADC; // Ahmed
    TClonesArray* scinNegADC; // Ahmed
    TClonesArray* scinPosTDC; // Ahmed
    TClonesArray* scinNegTDC; // Ahmed

 Action in THcHodoscope::CoarseProcess
 -------------------------------------
 scinPosADC = fPlanes[ip]-GetPosADC();
 hitPaddle  = (THcSignalHit*)scinPosADC->At(ihit))->GetPaddleNumber()-1;
Comment out debuging "cout"s in tof code
    Add Hodoscope features: Time differences and beta
      Compute time differences between planes
      Calculate beta and Chisquard for each track in the hodoscope.
      New variables: fBeta, fBetaChisq
      New histograms for time differences
Simplification of variables for Shower Counter calibration

Remove track related variables from the HMS Shower class, use ntuples
from the track (H.tr) block instead in the HMS calorimeter calibration
scripts.

- Remove a block of duplicated track related variables from the
THcShower class which have been added for calorimeter calibration
purposes.

- In hcal_calib directory, replace those variables with correspondent
variables from H.tr block in the calorimeter calibration class
(THcShowerCalib.h), in the cut (hcal_replay_cuts.def) and output
(output_hcal_replay.def) definitions.
Fix definitions of fBeta, fBetaChisq and fFPTime.
    Time difference variables now defined in output.def
Merge remote-tracking branch 'upstream/develop' into develop_macosx