Fixing PSR-1 standard issues
Fixing PSR-1 issues in installer
Fixing global variable
Boolean should be compared strictly
Update phpdotenv to 1.0.9
Require PHP 5.4

Although there is no hard requirement on this, 5.3 should not be
"allowed" since it's reached end of life and isn't even supported
anymore.
Updates to default deploy.rb config

`linked_files` and `linked_dirs` updated to match official Capistrano
defaults. This allows plugins to set these variables as well.
Use WordPress composer package
Update WordPress to 4.0.1
Update CHANGELOG for 1.3.0
Mention bump to PHP 5.4 in README.md

Closes #120 #121
Add Capistrano task to update WorkPress option paths. Fixes #98
Update CHANGELOG.md
Remove duplicate "application.php" in illustrative folder structure
Remove WPLANG constant

https://github.com/WordPress/WordPress/commit/d5446106816d5660774fce78a34217728c7fcee8
Truly disable all updates via WP admin UI

DISALLOW_FILE_MODS implicitly includes AUTOMATIC_UPDATER_DISABLED and
DISALLOW_FILE_EDIT, plus it hides the update notifications in the admin
bar and the "Updates" sub-menu in the "Dashboard" admin menu, and it
also hides "Update Available" messages in "Appearance -> Themes" and
"Plugins -> Installed Plugins".
Revert "Truly disable all updates via WP admin UI"
Update bedrock-autoloader.php

Call load_plugins() method on construct instead of the plugins_loaded hook

The mu-plugins are actioned before normal plugins in the action order. Some mu plugins are required
The bedrock-autoloader mu-plugin seems to fulfil two purposes. it a) allows the use of composer to make mu-plugins dependancies but running mu-plugins from within directories. b) allows normal plugins to act like mu plugins. However by running the mu-plugins further down the action order list, neither mu-plugins or plugins are behaving exactly as standard mu-plugins should. This could be important if the mu-plugin you are requiring via composer does some setup that normal plugins will then use. In the current implementation it will be loaded after the normal plugins.