Update JunctionTreeSpecs.scala
Dual Decomposition base for AD3
Renamed seqs(length, dom) to seqsOfLength(length, dom) to avoid confusion with seqs(dom, maxLength)
Some documentation for operators
Began support in FG for calculating expectations
Move DD to DualDecomposition
Merge branch 'AD3' into dev
Fixed OptimizedOperators to recognize model annotations during argmin
First optimized expectation operator spec is passing.
more expectation specs
linear chain marginals spec passes
comments on the main inference code generation method.
Way to give clients access to factor graph used in inference.
renamed flip to bernoulli (as flip has a generative story flavour)
bernoulli expectation spec added for fun
spec wording fixed
updated to factorie 1.0
added token.sc to source control
Setting version to 0.2.0
fixed scalac options in build