Add function for escaping mysql dump, plus small tweaks
Added functional search to collections
Throw exception when encountering unicode characters, because ParseBuffer can't deal with them yet
Added function for decoding http entities
Add CamelCase utility. Add utility for checking nulls
Rename prefs package, and add PreferenceEntry class, that combines a preference (key) with preference manager
Classes to read recordStreams from excel and ods files
New bound function on math utils
Switch from RecordStreamException to StreamException, it fits better with generic Stream interface
Copied collapsing div functions from BioPAX validator
Math.safeDivide added
Put classes on collapseable divs
added RecordStreamFormatter.asTableModel
Use commons-net-ftp for downloading ftp files
Getting file size is optional
use passive mode ftp
Use contentLength int for java 1.6 compatibility
New util.TempFile class. Improved error handling when Downloading from FTP. Improved GML output, now generate both id and label automatically