Added script to train augustus parameters to find gene models from supplied EST evidence or supplied gene models.
Merge branch 'augustus'
Fixed merge conflicts
Will now run on SGE.
Corrected misisng hash on spacer line.
A program to parse .gff3 files output from PASA into .gff files accepted by augustus.
Working script.
Deleted hashed-out lines
Discovered not working, needed to set column 3 as CDS or mRNA. Now sets column 3 as CDS evidence. Also now prints usgae on failed input
Added gene_size.pl.A program to calculate the mean size of genes predicted from pasa