A set of commits for making a hive versions of WGA2GenesDirect.
Most files involved are new, however I've modified GeneScaffold to accept an ignore_translation flag
the the constructor. For the moment I haven't added this functionality, as the module seems to be
based on the idea that you need a translation. However the code I added is the framework for disabling
the checks. More code will be needed if the module is to then work on these non-coding transcripts.
This commit can be ignored.
Was going to replace WGA2GenesDirect with this module, but instead copied the original and
just put Hive on the start of the module name. Just committing this so that I have a record
of it, but don't plan on using it for anything.