created function for calculation of q-values

as per Storey and Tibshirani (2003), this function takes a list
of p-values, estimates pi0(lambda), and calculates the q value
for each of the p-values in the list
completed gene set enrichment analysis functionality

complete GSEA analysis according to Subramanian et al. (2005) and
Tamayo et al. (2012) with multithreading has been added. Changes
include:

1) signal to noise ratio function now returns SNR with st dev
bounded to min 20% of signal mean.

2) enrichment score is normalised according to the mean of the
null distribution

3) permutations for null distribution are now calculated across
three separate processes, allowing almost 300% faster calculation.

4) q value calculation from Subramanian et al. (2005) using the
total normalised null distribution has been incorporated.

5) regular q-value calculation according to Storey and
Tibshirani (2005) has been included (not utilised in GSEA), with
graphing of lambda estimation and p-value distribution included.
improved plotting of null distribution and stats output

allowed the number of processes generated to be fed in at CLI, as
well as whether or not to display the normalised null and
observed distributions.