refactoring, cleaning up old code
removed obsolete exception, replaced by common runtime exceptions
(often IllegalArgument, sometimes IndexOutOfBounds or RuntimeException)
removed old package-info files
instantiator context is now a node to track hierarchy
corrected bug in InstantiationContext#getName
changed check in validator to "normal" because it uses the instantiator
temporary fix in entity mapper. changed maps in instantiator data.
Now using the context in maps, because when a sub-network is modified,
we need to update the Instance objects that reference it.
added "delete" method to Node
working on partial instantiation update... still buggy
corrected bug in findTopFrom
built-in entities were registered as "top" because their URIs were not
normalized
instantiator only instantiates when necessary
Avoids useless instantiations. Still limited, does not handle new
entities added (should go in the top) and then instantiated (should move
from topEntities to instantiatedEntities). Getting there though.
fixed ModuleCompilerImpl#serialize (URI was not properly deresolved)
corrected bug with instantiation context lacking an instance