Merge pull request #185 from igemsoftware/master

master into Cao
Package jar into software under windows finished
Merge pull request #188 from igemsoftware/Branch-chyb

Package jar into software under windows finished
some changes
Merge pull request #189 from igemsoftware/Cao

Cao
fix new bug
Merge pull request #190 from igemsoftware/LC

fix new bug
Merge pull request #191 from igemsoftware/master

Victor