cleanup and removal of debug code that is no longer necessary
switch to MessageLogger for logs
removing obsolete creation of output directory in fake BU
new version of test script
fixed log output throttling for one log message
removing obsolete test scripts
modifications to jsd file format, added backup of output.jsd for hltd to pick up
added back assertion checks in input source and FMS
reduced sleep time while waiting for next chunk to avoid idling for too long