First complete draft.
Fix typo.
Change formatting, modify presentation of design work.
minor edit to readme file
SJS edited introduction
SJS Added Amir's changes to MD Methods section and bib file
SOme edits to Discussion, SJS
SJS edits more results. Note that the previous commit was also about results, not discussion.
SJS edited Disc.
compiled pdf of steph's edits
New Rat4Site EVol. rates:

All are available now EXCEPT: Dengue & Hepatisis for which the code crashed, likely because of the large number of sequences (> 2000 for Dengue).
Merge branch 'master' of github.com:/clauswilke/structural_prediction_of_ER
Changed fig1/2 order
Figure 2 legend said insig is \leq 0.05, now says \geq
Fig 1 also had insig pvalue issue
Edits to omega-entropy caption to say x=y line
Found more leq/geq. Fixed
compiled edits
Merge branch 'master' of https://github.com/clauswilke/structural_prediction_of_ER
Fixed table 3 caption to reflect only 6 structures used for RMSF