Added RateModifier base and derived classes
Initial work on WL-MCMC
Admixture and CharacterHistory updates
Fixes to make my compiler happy, nothing serious
Can now instantiate a branch history w/ rate mods as a stochastic node
fixed AbstractCharacterHistoryRateModifier ostream merge conflict
Basic CharacterHistory lnL/redrawValue working
basic lnL for tree w/ CharacterHistory working
Added CH path update
corrected TreeCharacterHistory::redrawValue() to properly resample histories
path update move now works by correcting BranchHistory copy ctor
node update and simulate added (partially tested)
CH simulate() now records path (not just tip values), added line & square sim geographies
Minor bug fix with initialization of model monitor from Rev-language
fix in beta distribution of Rev object
Added a Bernoulli distribution for graphical models manuscript examples
More fixes. First example is done now ... :)
Convenience access of members in character data objects using []-operator.
updating compilable projects
updating compilable projects 2