unused templates removed; samplesheets regenerated when the existing file is likely to originate  from an earlier or unknown run
Changes update; do not attempt to address a scenario with two pending runs for the same flowcell in the samplesheet daemon
ensure copyright belongs to GRL
Merge pull request #160 from mgcam/devel

samplesheet regenerated when the existing file does not come from the currently pending run
use git describe directly to avoid need for gitver script
Merge pull request #3 from dkj/devel

ensure genome reference retrival works when transcriptome given
Merge pull request #161 from jidur/transcriptome

Transcriptome: Changes for not using a default transcriptome
pass Illumina samplesheet study name field components through a filter to replace commas
Merge pull request #164 from mgcam/devel

pass Illumina samplesheet study name field components through a filter t...
Remove gitver script
Merge branch 'devel' of https://github.com/wtsi-npg/npg_tracking into git_versioning
Merge in wtsi-npg devel; modify Changes for release 77.1
Merge pull request #163 from KateTaylor/git_versioning

use git describe directly to avoid need for gitver script
Merge pull request #165 from wtsi-npg/devel

pull request from wtsi devel to master - release 77.1
Merge pull request #166 from wtsi-npg/master

pull request from wtsi master to devel (release 77.1)
remove redundant paths from npg_tracking::illumina::run::folder
Merge pull request #167 from mgcam/devel

remove redundant paths from npg_tracking::illumina::run::folder
Samplesheets now handle dual indexes
if git version does not start with a digit, 0.0 is prepended; group path definitions together
POD