Miscellaneous fixed in string handling
Changed build number to 595
Added notes to CondensedPatternMatrix about things that need fixing
Corrected explanation text.
Corrected DNAData.sameState; it previously always returned true.
Fixed CategoricalData.getDataCopy so that it returns matrices of the
same type as the original
Fixed CondensedPatternMatrix so that weightset is attached to correct
matrix
attached weight set in newFilledMatrix of ManageCharacters if weightset
exists in incoming matrix
Removed unneeded code in ManageCharacters
Adding green, red, blue scales to trace character history
Merge pull request #7 from MesquiteProject/master

Moving things back into wmaddisn
Removed conflict from align
Merge branch 'master' of https://github.com/wmaddisn/MesquiteCore.git
Cleaned up CondensedPatternMatrix and finalized - set as non prerelease.
Merge branch 'master' of https://github.com/wmaddisn/MesquiteCore.git
Improvements to the adjusting sequences during sequence import.
Upgraded ShadeNumbersOnTree so that you can turn off shading and just
have labels; other improvements to where labels are written, and whether
or not the terminal labels are shown.
Improved warning system if Bipartition internal branch lengths array is
too small
Improved array size warnings in BipartitionVector
Fix to BipartitionVector so it automatically increases its storage size
if needed