Added TOF and ClusterSize TCutG checks to ParticleReconstruction. Had to change how it handled this a bit, but should be close to the original method if no TOF or ClusterSize cut file is provided. Also removed various unused methods and uncommented code
Added TAPS TOF cut example
Removed duplicate GHistBGSub from CMakeLists
Changed default email address for farming scripts to assume kph email with account username
Edited farming scripts to adjust waiting time when too many jobs are already submitted
TreeTrigger: Added branches: mc_evt_id, mc_rnd_id for pluto MC true information matching.

These branches get filled with ID numbers then creating
pluto data (using the "split_pluto_events" program, for example).
Then they get passed through a2geant and acqu. Using these you can then
later check that the reconstructed events match with the events stored
in the pluto mc true tree when combining.
Added Pluto Tree
Added random ID to GPlutoTree.
CMakeLists.txt: Clean up output and fixup
Added GTreeA2Geant