Update before merging to master!
Adding python scripts for sorting and categorizing VP outputs.
adding all vor hrmc stuff. will remove crap later.
Major clean up since I haven't commited in forever.
added some headers and fixes and info to VP python scripts
Pushing all the voronoi scripts I wrote. Now there is a series of them in vor/scripts/ that ultimately result in atom_graph.py which runs the fortran voronoi code and does some cluster analysis. currently it finds the unique clusters of a certain vp type
Updates to vp scripts.
forgot to add some files that i created
Added and updated vor and other scripts. At some point I need to move these scripts, because they are now much more than just voronoi code stuff.
Added general voronoi stuff, this folder should really be cleaned up.
Made some nice changes to the cluster analysis files. Namely, now each cluster is saved in cif format when cluster_analysis.py is run.
Major update of a bunch of stuff. Nothing huge changed, but a lot of stuff was minorly changed.
Deleting Peis old stuff and adding correct final simulations
Updating some voronoi stuff
Adding and updating voronoi / model analyis python deck
This version of 2d_rdf.py is a decent working version that identifies the correct peak locations usings blur_image and detect_peaks. Can't believe how well it works actually! I have an igor plot of it saved.
2d_rdf.py now does some analysis and tells you how to finish it to get the correct plane spacings.
Its probably about done now, unless I can automate it to get the plane spacings somehow, which would be really nice.
Update of add files. Going to split this repo shortly
Merge branch 'vor-branch' of /home/jjmaldonis/OdieCode

Conflicts:
	.gitignore