Added initial section and figures describing the problem set up.
Added the ctf manual as a reference, copied over the introduction from the previous paper. Added a table of contents and a list of figures.
Modified the contact emails and split the TOC and LOF into seperate pages.
Completed a basic outline of the paper. A little choppy but spends some time over COBRA-TF, and the residual formulation. Spends a lot of time on the steps for proper verification. Breaks it down into code and solution verification. Plan on listing results for multiple solution methods and with parameter sweeps. Parameter sweeps may not be able to fit into paper, will see.