Big function rename. Not functional yet.
New files. Still not functional.
Implement new features. Almost functional.
Utilities added. Functional.
Test suite added.
Test suite seems to work.
Beginnings of a manual.
Manual, better organization.
Initialization reorganized, added mixed state transfer (buggy).
Temporary fix for the non-orthogonal eigenvectors bug.
Testing more complicated control transforms.
Trajectory plotting utility (uses QIT), small fixes.
CR/LF normalization, character encoding issues fixed.
Git control files.
More detailed derivation of the N-R gate optimization method.
Fixed N-R derivation, added some testing code.
More NR stuff (which works now), some renaming.
N-R goal function and its Jacobian, conditioning.
Added projection to traceless subalgebra, fixed a bug.
Bug in NR Jacobian code fixed, now it seems to work.