all.unique to all_unique in the example.
The following files are already in R: 'jss.bst', 'jss.cls'
and I remove them from the package.
paramters to parameters
laply -> lapply , and some tree to dend fixes.
edgeText is not needed here.
Added warn = dendextend_options("warn") to docs

(also added NA_to_0L)
Break lines which were too long.
new function: `rainbow_fun` - uses rainbow_hcl, or rainbow (if colorspace is not available)
Added spaces to docs
Moved ggdendro, labeltodendro, dendroextras, ape to "Enhances:" in DESCRIPTION. (include fixing tests, and adding library - so to through errors in case the package is not available)
Update NEWS.md and ChangeLog before CRAN release. for 0.17.0
erased file
Moved dendextend-tutorial.rnw to vignettes\disabled - so it is still there, but not compiled.
Also moved dendextend-tutorial.pdf to inst\doc - so there is a copy of this older vignette, but without needed to run it with all the benchmarks... (it is also compressed)
Created a copy of "introduction.html" in inst/ignored (so people could see it on github)