Merge pull request #1057 from melissalinkert/windows-tests

Fix file handle/line ending issues so that tests pass on Windows
Update auto-generated documentation

Repository: openmicroscopy/bioformats
Already up-to-date.

Generated by BIOFORMATS-5.1-latest-docs-autogen#57 (http://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest-docs-autogen/57/)
merge develop -D org: PR 857 (Initial support for Zeiss .lms files)
merge develop -D org: PR 858 (Initial support for Veeco AFM data)
merge develop -D org: PR 981 (Ignore namespaces when filling in an XMLAnnotation's Value)
merge develop -D org: PR 983 (Woolz: make sure the service is initialized when calling openBytes (rebased onto develop))
merge develop -D org: PR 1028 (Large fileset performance improvements (rebased onto develop))
merge develop -D org: PR 1049 (DICOM: fix file grouping so that path names are normalized (rebased onto develop))
merge develop -D org: PR 1055 (Fix up Bio-Formats POMs (rebased))
merge develop -D org: PR 1060 (Allow dist-matlab to run on Windows)
merge develop -D org: PR 1063 (Micromanager fixes (rebased onto develop))
merge develop -D org: PR 1065 (Update auto-generated documentation)
merge develop -D org

Repository: openmicroscopy/bioformats
Excluded PRs:
  # PR 1054 qidane 'Additional annotation points throughout the model' (label: exclude)
  # PR 1015 qidane 'Messy binary' (exclude comment)
  # PR 978 berl 'Add writing of .v3draw format for easy loading with Vaa3D.' (user: berl)
  # PR 528 melissalinkert 'Tile performance improvements for VMS and NDPI' (label: exclude)
  # PR 816 melissalinkert 'Add support for multi-channel Volocity Clipping datasets' (label: exclude)
Updating d97fd41..9f1a93b
Merged PRs (fast-forward):
  # PR 1057 melissalinkert 'Fix file handle/line ending issues so that tests pass on Windows'

Merged PRs:
  # PR 857 melissalinkert 'Initial support for Zeiss .lms files'
  # PR 858 melissalinkert 'Initial support for Veeco AFM data'
  # PR 981 melissalinkert 'Ignore namespaces when filling in an XMLAnnotation's Value'
  # PR 983 melissalinkert 'Woolz: make sure the service is initialized when calling openBytes (rebased onto develop)'
  # PR 1028 melissalinkert 'Large fileset performance improvements (rebased onto develop)'
  # PR 1049 melissalinkert 'DICOM: fix file grouping so that path names are normalized (rebased onto develop)'
  # PR 1055 rleigh-dundee 'Fix up Bio-Formats POMs (rebased)'
  # PR 1060 melissalinkert 'Allow dist-matlab to run on Windows'
  # PR 1063 melissalinkert 'Micromanager fixes (rebased onto develop)'
  # PR 1065 sbesson 'Update auto-generated documentation'

Generated by OMERO-5.1-merge-push#178 (http://ci.openmicroscopy.org/job/OMERO-5.1-merge-push/178/)