Define dependencies in Makefile
Add method for setting the bit-values from link vectors
Begin read function, and fix formatting
Merge branch 'read_dev' into newformat

* read_dev:
  Begin read function, and fix formatting
  Add method for setting the bit-values from link vectors
  Define dependencies in Makefile

Conflicts:
	include/CrateLinks.h
Update set_links to 6 32-bit words
Set up read/write test
Add empty CaloLinks constuctor
Use uint32_t in set_links
Implement read from file function