ImageJ: disable file grouping when not reading from the filesystem

In particular, this disables grouping when reading over HTTP, as that is
at best extremely slow.

Fixes #12158.
ND2: adjust SizeC correction for small single plane datasets

Fixes #12222.
make: Convert variables to ant properties
QuickTime: reset stream if an invalid atom length is found

This is particularly necessary if the "header" is at the end of the file.

Also clarifies a variable name that's been annoying me for a while, and
fixes a couple of typos.

Fixes #12218.
build: Pass through all jenkins env vars
Merge pull request #1084 from rleigh-dundee/make-props-dev50

make: Convert variables to ant properties
Merge pull request #1086 from melissalinkert/ticket-12218

QuickTime: fix header/footer parsing bug
Merge pull request #1085 from melissalinkert/nd2-line-scan

Fix single plane ND2 line scan
Merge pull request #1081 from melissalinkert/disable-group-files

Disable file grouping in ImageJ remote import plugin
Update auto-generated documentation

Repository: openmicroscopy/bioformats
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