Add MKFILE_DEPS to compiler-rt target

Currently when you run `make -jN` it's likely that you'll remove compiler-rt and
then it won't get cp'd back into the right place. I believe the reason for this
is that the compiler-rt library target never got updated so make decided it
never needed to copy the files back into place. The files were all there at the
beginning of `make`, but then we may clean out the stage0 versions if we unzip
the snapshot again.
Test fixes and rebase conflicts from rollups

PRs closed as part of this:

Closes #12212 r=alexcrichton
Closes #12215 r=brson
Closes #12246 r=pcwalton
Closes #12247 r=cmr
Closes #12251 r=brson
Closes #12255 r=alexcrichton
Closes #12257 r=alexcrichton
Closes #12258 r=huonw
Closes #12259 r=huonw
Closes #12263 r=kballard