fix: update for use in workflow and reflect new nipype conventions
fix: TOPUP naming and flexibility on extension overloading based on name
fix: more topup naming fixes
Merge branch 'master' into fix/eddy

* master:
  fix: moving save from numpy to pickle
  install ordereddict for py26
  fix: moving save from numpy to pickle
  install ordereddict for py26
  fix: update conda in environment
  fix: parenthesis fixes
  dbg: anaconda to miniconda update
  dbg: conda update
  fix: update conda
  ENH: Large SGE jobs were overloading on qstat
tst: updated tests
fix: updated apply topup
fix: arg generation
fix: topup workflow
tst: dummy files
New camino interface for ImageStats
Added newline at end of file
Fixed missing outputfiles
updated missin autotests
Merge pull request #821 from chrisfilo/fix/first

Fixed missing outputfiles
New fsl Unarymaths options (retake)
few minor spell fixes
Update Vagrantfile
fix: tests
Merge remote-tracking branch 'upstream/master' into fix/misc

* upstream/master:
  Update Vagrantfile
  few minor spell fixes
  Fixed missing outputfiles
doc: added commandline flag and position generation to help string