enhancement gatk recal '-rf BadCigar' to process even non-conform bams
bugfix: Sampleconfig gatkvariant batch; enhancement gatkVarcal also needed -rf BadCigar
bugfix GATK_VARBatch
bugfix gatkVarbatch
app note added
presentation
poster and conference abstracts
endnote library
always ignore endnote library stuff
cleanup after github
Fix merge conflict
working version of iss34 genomic feature coverage annotator
iss34 added binning
Merge remote-tracking branch 'upstream/iss34_CovPlot' into masai_fseq

Conflicts:
	.gitignore
	bin/trigger.sh
Merge branch 'master' into masai_fseq

Conflicts:
	.gitignore
	bin/trigger.sh