Added .gitignore file
cleaned up directory
Merge branch 'master' of https://github.com/mdhim/mdhim-tng
Merged from MDHIM-tng master
Merge branch 'mdhim-tng-master'
Merged from mdhim-tng master new API
Added support for index names
Removed duplicated files
Finished cleaning up from the merge and Reanamed a variable in a function from 'new' to 'addition' being that 'new' is a reserved word in C++
Added support for index names
Removed PLFS changes
Fixed more PLFS accedental merges
Fixed some bugs
Added java api created with jnaerator
Fix for invalid work item
Fixes for race conditions on mdhim_comm communicator
Added per-object locking mpich to makefile
Merge branch 'master' of https://github.com/mdhim/mdhim-tng into mdhim-tng-master
Merged in Hugh's changes for deadlocking