update
Merge pull request #418 from holtgrewe/hotfix/app_tests_normalize_crlf

[HOTFIX] Normalizing line endings by default in app tests. (master)
Merge pull request #422 from holtgrewe/hotfix/compare_text_file_line_endings

[FIX] Normalizing line endings when comparing text files (master).
[Fix] Converted double align scores to int scores to avoid different 32bit 64bit behaviour.
Merge branch 'develop' of https://github.com/seqan/seqan into develop
Merge branch 'master' into develop
[FIX] Adjusted gold standard to new MD string.
Merge pull request #427 from skrakau/develop

Bisar: converted alignment scores to integers