Merge with reorganized repo with analysis scripts

I've reorganized our somewhat disorganized repo. I've also included all of the scripts I've used to mess with the data. Of greatest significance is Analysis.py, which should be useful to anyone messing with plug data. This takes input in the form of csv files that contain only amp data. I've included the scripts I've used to generate this data as well as the data itself. Every script or program I've written is commented and has an associated README.txt. If I recall correctly, I've also included readmes elsewhere as needed.

I've also included a github guide. It's at Analysis/how_to_git.txt. Please add to it where it is lacking.