[preview] flow timeout v2.0

Redesign of flow timeout handling.
- Uses all threads for injecting pseudo packets
- Uses correct thread for injection
- Uses live engine at shutdown as well

Prscript:
- PR build: https://buildbot.openinfosecfoundation.org/builders/inliniac/builds/89
- PR pcaps: https://buildbot.openinfosecfoundation.org/builders/inliniac-pcap/builds/89